Browsing ODA Open Digital Archive by Author "Ramberg, Sigmund"
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Characterization of Differentially Expressed miRNAs and Their Predicted Target Transcripts during Smoltification and Adaptation to Seawater in Head Kidney of Atlantic Salmon
Shwe, Alice; Østbye, Tone-Kari K; Krasnov, Aleksei; Ramberg, Sigmund; Andreassen, Rune (Genes;Volume 11, Issue 9, Journal article; Peer reviewed, 2020-09-08)Smoltification and early seawater phase are critical developmental periods with physiological and biochemical changes in Atlantic salmon that facilitates survival in saltwater. MicroRNAs (miRNAs) are known to have important ... -
A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon
Ramberg, Sigmund; Bjørn, Høyheim; tone-kari, knutsdatter østbye; Andreassen, Rune (Frontiers in Genetics;April 2021 | Volume 12 | Article 656334, Peer reviewed; Journal article, 2021-04-27)Atlantic salmon (Salmo salar) is a major species produced in world aquaculture and an important vertebrate model organism for studying the process of rediploidization following whole genome duplication events (Ss4R, 80 ... -
Differential Expression of miRNAs and Their Predicted Target Genes Indicates That Gene Expression in Atlantic Salmon Gill Is Post-Transcriptionally Regulated by miRNAs in the Parr-Smolt Transformation and Adaptation to Sea Water
Shwe, Alice; Krasnov, Aleksei; Visnovska, Tina; Ramberg, Sigmund; Tone-Kari, Østbye; Andreassen, Rune (International Journal of Molecular Sciences;Volume 23 / Issue 15, Peer reviewed; Journal article, 2022-08-08)Smoltification (parr-smolt transformation) is a complex developmental process consisting of developmental changes that lead to remodeling of the Atlantic salmon gill. Here, the expression changes of miRNAs and mRNAs were ... -
Expression Analysis in Atlantic Salmon Liver Reveals miRNAs Associated with Smoltification and Seawater Adaptation
Shwe, Alice; Krasnov, Aleksei; Visnovska, Martina; Ramberg, Sigmund; Tone-Kari, Østbye; Andreassen, Rune (Biology (Basel);Volume 11 / Issue 5, Peer reviewed; Journal article, 2022-04-30)Smoltification is a developmental process that preadapts Atlantic salmon for a life in seawater. Suboptimal smoltification and poor timing of transfer to seawater is associated with increased mortality. MicroRNAs (miRNAs) ... -
De novo high-accuracy transcriptomes from long-read sequencing reveals a wide variety of novel splice variants in copepodids and adult female salmon lice (Lepeophtheirus salmonis)
Hansen, Sine Alise Hartvigsen; Ramberg, Sigmund; Kiryushchenko, Nadezhda; Høyheim, Bjørn; Horsberg, Tor Einar; Andreassen, Rune; Bakke, Marit Jørgensen (Peer reviewed; Journal article, 2023)