• Artificial intelligence in dry eye disease 

      Storås, Andrea Marheim; Strumke, Inga; Riegler, Michael Alexander; Grauslund, Jakob; Hammer, Hugo Lewi; Yazidi, Anis; Halvorsen, Pål; Gundersen, Kjell Gunnar; Utheim, Tor Paaske; Jackson, Catherine Joan (The ocular surface;Volume 23, January 2022, Peer reviewed; Journal article, 2021-12-01)
      Dry eye disease (DED) has a prevalence of between 5 and 50%, depending on the diagnostic criteria used and population under study. However, it remains one of the most underdiagnosed and undertreated conditions in ophthalmology. ...
    • Artificial intelligence in the fertility clinic: status, pitfalls and possibilities 

      Riegler, Michael Alexander; Stensen, Mette Haug; Witczak, Oliwia; Andersen, Jorunn Marie; Hicks, Steven; Hammer, Hugo Lewi; Delbarre, Erwan; Halvorsen, Pål; Yazidi, Anis; Holst, Nicolai; Haugen, Trine B. (Human Reproduction;Volume 36, Issue 9, Peer reviewed; Journal article, 2021-07-29)
      In recent years, the amount of data produced in the field of assisted reproduction technology [ART] has increased exponentially. The diversity of data is large, ranging from videos to tabular data. At the same time, ...
    • Assessing generalisability of deep learning-based polyp detection and segmentation methods through a computer vision challenge 

      Ali, Sharib; Ghatwary, Noha; Jha, Debesh; Isik-Polat, Ece; Polat, Gorkem; Yang, Cheng; Li, Wuyang; Galdran, Adrian; Ballester, Miguel Angel Gonzalez; Thambawita, Vajira L B; Hicks, Steven; Poudel, Sahadev; Lee, Sang-Woong; Jin, Ziyi; Gan, Tianyuan; Yu, Chenghui; Yan, JiangPeng; Yeo, Doyeob; Lee, Hyunseok Lee; Tomar, Nikhil Kumar; Haitham, Mahmood; Ahmed, Amr; Riegler, Michael Alexander; Daul, Christian; Halvorsen, Pål; Rittscher, Jens; Salem, Osama E.; Lamarque, Dominique; Cannizzaro, Renato; Realdon, Stefano; de Lange, Thomas; East, James E (Peer reviewed; Journal article, 2024)
      Polyps are well‑known cancer precursors identified by colonoscopy. However, variability in their size, appearance, and location makes the detection of polyps challenging. Moreover, colonoscopy surveillance and removal ...
    • Automatic Unsupervised Clustering of Videos of the Intracytoplasmic Sperm Injection (ICSI) Procedure 

      Storås, Andrea; Riegler, Michael Alexander; Haugen, Trine B.; Thambawita, Vajira L B; Hicks, Steven Alexander; Hammer, Hugo Lewi; Kakulavarapu, Radhika; Halvorsen, Pål; Stensen, Mette Haug (Chapter; Conference object, 2023)
      The in vitro fertilization procedure called intracytoplasmic sperm injection can be used to help fertilize an egg by injecting a single sperm cell directly into the cytoplasm of the egg. In order to evaluate, refine and ...
    • CELLULAR, A Cell Autophagy Imaging Dataset 

      al Outa, Amani; Hicks, Steven; Thambawita, Vajira L B; Andresen, Siri; Enserink, Jorrit Martijn; Halvorsen, Pål; Riegler, Michael Alexander; Knævelsrud, Helene (Peer reviewed; Journal article, 2023)
      Cells in living organisms are dynamic compartments that continuously respond to changes in their environment to maintain physiological homeostasis. While basal autophagy exists in cells to aid in the regular turnover of ...
    • A Comprehensive Study on Colorectal Polyp Segmentation with ResUNet++, Conditional Random Field and Test-Time Augmentation 

      Jha, Debesh; Smedsrud, Pia; Johansen, Dag; de Lange, Thomas; Johansen, Håvard D.; Halvorsen, Pål; Riegler, Michael Alexander (IEEE journal of biomedical and health informatics; Volume: 25, Issue: 6, June 2021, Journal article; Peer reviewed, 2021-01-05)
      Colonoscopy is considered the gold standard for detection of colorectal cancer and its precursors. Existing examination methods are, however, hampered by high overall miss-rate, and many abnormalities are left undetected. ...
    • DoubleU-Net: A Deep Convolutional Neural Network for Medical Image Segmentation 

      Jha, Debesh; Riegler, Michael Alexander; Johansen, Dag; Halvorsen, Pål; Johansen, Håvard D. (IEEE International Symposium on Computer-Based Medical Systems; 2020 IEEE 33rd International Symposium on Computer-Based Medical Systems (CBMS), Conference object, 2020-09-01)
      Semantic image segmentation is the process of labeling each pixel of an image with its corresponding class. An encoder-decoder based approach, like U-Net and its variants, is a popular strategy for solving medical image ...
    • Enhancing investigative interview training using a child avatar system: a comparative study of interactive environments 

      Zohaib Hassan, Syed; Shafiee Sabet, Saeed; Riegler, Michael Alexander; Baugerud, Gunn Astrid; Ko, Hayley Manalang; Salehi, Pegah; Røed, Ragnhild Klingenberg; Sinkerud Johnson, Miriam; Halvorsen, Pål (Peer reviewed; Journal article, 2023)
      The impact of investigative interviews by police and Child Protective Services (CPS) on abused children can be profound, making effective training vital. Quality in these interviews often falls short and current training ...
    • Enhancing questioning skills through child avatar chatbot training with feedback 

      Røed, Ragnhild Klingenberg; Baugerud, Gunn Astrid; Zohaib Hassan, Syed; Shafiee Sabet, Saeed; Salehi, Pegah; Powell, Martine B.; Riegler, Michael Alexander; Halvorsen, Pål; Sinkerud Johnson, Miriam (Peer reviewed; Journal article, 2023)
      Training child investigative interviewing skills is a specialized task. Those being trained need opportunities to practice their skills in realistic settings and receive immediate feedback. A key step in ensuring the ...
    • File System Support for Privacy-Preserving Analysis and Forensics in Low-Bandwidth Edge Environments 

      Ovesen, Aril Bernhard; Nordmo, Tor-Arne Schmidt; Johansen, Håvard D.; Riegler, Michael Alexander; Halvorsen, Pål; Johansen, Dag (Information;Volume 12, Issue 10, Peer reviewed; Journal article, 2021-10-18)
      In this paper, we present initial results from our distributed edge systems research in the domain of sustainable harvesting of common good resources in the Arctic Ocean. Specifically, we are developing a digital platform ...
    • Flexible device compositions and dynamic resource sharing in PCIe interconnected clusters using Device Lending 

      Markussen, Jonas Sæther; Bjørlykke Kristiansen, Lars; Borgli, Rune Johan; Stensland, Håkon Kvale; Seifert, Friedrich; Riegler, Michael Alexander; Griwodz, Carsten; Halvorsen, Pål (Cluster Computing volume;Volume 23, issue 2, Journal article; Peer reviewed, 2019-09-21)
      Modern workloads often exceed the processing and I/O capabilities provided by resource virtualization, requiring direct access to the physical hardware in order to reduce latency and computing overhead. For computers ...
    • GANEx: A complete pipeline of training, inference and benchmarking GAN experiments 

      Thambawita, Vajira; Hammer, Hugo Lewi; Riegler, Michael Alexander; Halvorsen, Pål (International Workshop on Content-Based Multimedia Indexing, CBMI;, Conference object, 2019-10-21)
      Deep learning (DL) is one of the standard methods in the field of multimedia research to perform data classification, detection, segmentation and generation. Within DL, generative adversarial networks (GANs) represents a ...
    • Identifying Important Proteins in Meibomian Gland Dysfunction with Explainable Artificial Intelligence 

      Storås, Andrea; Magnø, Morten Schjerven; Fineide, Fredrik; Thiede, Bernd; Chen, Xiangjun; Strumke, Inga; Halvorsen, Pål; Utheim, Tor Paaske; Riegler, Michael Alexander (Peer reviewed; Journal article, 2023)
      Meibomian gland dysfunction is the most common cause of dry eye disease and leads to significantly reduced quality of life and social burdens. Because meibomian gland dysfunction results in impaired function of the tear ...
    • Kvasir-Capsule, a video capsule endoscopy dataset 

      Smedsrud, Pia H; Thambawita, Vajira L B; Hicks, Steven; Gjestang, Henrik; Olsen Nedrejord, Oda; Næss, Espen; Borgli, Hanna; Jha, Debesh; Berstad, Tor Jan; Eskeland, Sigrun Losada; Lux, Mathias; Espeland, Håvard; Petlund, Andreas; Dang Nguyen, Duc Tien; Garcia, Enrique; Johansen, Dag; Schmidt, Peter Thelin; Toth, Ervin; Hammer, Hugo Lewi; de Lange, Thomas; Riegler, Michael Alexander; Halvorsen, Pål (Scientific Data;8, Article number: 142 (2021), Peer reviewed; Journal article, 2021-05-27)
      Artificial intelligence (AI) is predicted to have profound effects on the future of video capsule endoscopy (VCE) technology. The potential lies in improving anomaly detection while reducing manual labour. Existing work ...
    • LightLayers: Parameter Efficient Dense and Convolutional Layers for Image Classification 

      Jha, Debesh; Yazidi, Anis; Riegler, Michael Alexander; Johansen, Dag; Johansen, Håvard D.; Halvorsen, Pål (Lecture Notes in Computer Science;Volume 12606, Conference object, 2021-02-21)
      Deep Neural Networks (DNNs) have become the de-facto standard in computer vision, as well as in many other pattern recognition tasks. A key drawback of DNNs is that the training phase can be very computationally expensive. ...
    • Machine Learning-Based Analysis of Sperm Videos and Participant Data for Male Fertility Prediction 

      Hicks, Steven; Andersen, Jorunn Marie; Witczak, Oliwia; Lasantha Bandara Thambawita, Vajira; Halvorsen, Pål; Hammer, Hugo Lewi; Haugen, Trine B.; Riegler, Michael Alexander (Scientific Reports;9, Article number: 16770 (2019), Journal article; Peer reviewed, 2019-10-24)
      Methods for automatic analysis of clinical data are usually targeted towards a specific modality and do not make use of all relevant data available. In the field of male human reproduction, clinical and biological data are ...
    • A multi-centre polyp detection and segmentation dataset for generalisability assessment 

      Ali, Sharib; Jha, Debesh; Ghatwary, Noha; Realdon, Stefano; Cannizzaro, Renato; Salem, Osama E.; Lamarque, Dominique; Daul, Christian; Riegler, Michael Alexander; Ånonsen, Kim Vidar; Petlund, Andreas; Halvorsen, Pål; Rittscher, Jens; de Lange, Thomas; East, James E (Peer reviewed; Journal article, 2023)
    • Multimedia Datasets: Challenges and Future Possibilities 

      Nguyen, Thu; Storås, Andrea; Thambawita, Vajira L B; Hicks, Steven; Halvorsen, Pål; Riegler, Michael Alexander (Chapter; Peer reviewed; Conference object; Journal article, 2023)
      Public multimedia datasets can enhance knowledge discovery and model development as more researchers have the opportunity to contribute to exploring them. However, as these datasets become larger and more multimodal, besides ...
    • Njord: a fishing trawler dataset 

      Nordmo, Tor-Arne Schmidt; Ovesen, Aril Bernhard; Juliussen, Bjørn Aslak; Hicks, Steven; Thambawita, Vajira L B; Johansen, Håvard D.; Halvorsen, Pål; Riegler, Michael Alexander; Johansen, Dag (Chapter, 2022)
      Fish is one of the main sources of food worldwide. The commercial fishing industry has a lot of different aspects to consider, ranging from sustainability to reporting. The complexity of the domain also attracts a lot of ...
    • On evaluation metrics for medical applications of artificial intelligence 

      Hicks, Steven A.; Strumke, Inga; Thambawita, Vajira L B; Hammou, Malek; Riegler, Michael Alexander; Halvorsen, Pål (Scientific Reports;12, Article number: 5979 (2022), Peer reviewed; Journal article, 2022-04-08)
      Clinicians and software developers need to understand how proposed machine learning (ML) models could improve patient care. No single metric captures all the desirable properties of a model, which is why several metrics ...